Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.17■■□□□ 1.3
Trav15d-1-dv6d-1A0A075B624 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trav15d-1-dv6d-1A0A075B624 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Trav15d-1-dv6d-1A0A075B624 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.14■■□□□ 1.29
Trav15d-1-dv6d-1A0A075B624 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trav15d-1-dv6d-1A0A075B624 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trav15d-1-dv6d-1A0A075B624 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trav15d-1-dv6d-1A0A075B624 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23■■□□□ 1.27
Trav15d-1-dv6d-1A0A075B624 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trav15d-1-dv6d-1A0A075B624 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trav15d-1-dv6d-1A0A075B624 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trav15d-1-dv6d-1A0A075B624 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.97■■□□□ 1.27
Trav15d-1-dv6d-1A0A075B624 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trav15d-1-dv6d-1A0A075B624 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trav15d-1-dv6d-1A0A075B624 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.92■■□□□ 1.26
Trav15d-1-dv6d-1A0A075B624 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Trav15d-1-dv6d-1A0A075B624 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trav15d-1-dv6d-1A0A075B624 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trav15d-1-dv6d-1A0A075B624 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Trav15d-1-dv6d-1A0A075B624 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.86■■□□□ 1.25
Trav15d-1-dv6d-1A0A075B624 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Trav15d-1-dv6d-1A0A075B624 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Trav15d-1-dv6d-1A0A075B624 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trav15d-1-dv6d-1A0A075B624 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.82■■□□□ 1.24
Trav15d-1-dv6d-1A0A075B624 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Trav15d-1-dv6d-1A0A075B624 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trav15d-1-dv6d-1A0A075B624 Gm25238-201ENSMUST00000174914 89 ntBASIC22.78■■□□□ 1.24
Trav15d-1-dv6d-1A0A075B624 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trav15d-1-dv6d-1A0A075B624 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.75■■□□□ 1.23
Trav15d-1-dv6d-1A0A075B624 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trav15d-1-dv6d-1A0A075B624 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trav15d-1-dv6d-1A0A075B624 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trav15d-1-dv6d-1A0A075B624 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trav15d-1-dv6d-1A0A075B624 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trav15d-1-dv6d-1A0A075B624 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trav15d-1-dv6d-1A0A075B624 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.63■■□□□ 1.21
Trav15d-1-dv6d-1A0A075B624 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Trav15d-1-dv6d-1A0A075B624 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.62■■□□□ 1.21
Trav15d-1-dv6d-1A0A075B624 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Trav15d-1-dv6d-1A0A075B624 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.61■■□□□ 1.21
Trav15d-1-dv6d-1A0A075B624 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.56■■□□□ 1.2
Trav15d-1-dv6d-1A0A075B624 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trav15d-1-dv6d-1A0A075B624 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trav15d-1-dv6d-1A0A075B624 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trav15d-1-dv6d-1A0A075B624 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trav15d-1-dv6d-1A0A075B624 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trav15d-1-dv6d-1A0A075B624 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trav15d-1-dv6d-1A0A075B624 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.47■■□□□ 1.19
Trav15d-1-dv6d-1A0A075B624 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.46■■□□□ 1.19
Trav15d-1-dv6d-1A0A075B624 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Trav15d-1-dv6d-1A0A075B624 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trav15d-1-dv6d-1A0A075B624 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trav15d-1-dv6d-1A0A075B624 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.19
Trav15d-1-dv6d-1A0A075B624 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trav15d-1-dv6d-1A0A075B624 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trav15d-1-dv6d-1A0A075B624 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.42■■□□□ 1.18
Trav15d-1-dv6d-1A0A075B624 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trav15d-1-dv6d-1A0A075B624 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.4■■□□□ 1.18
Trav15d-1-dv6d-1A0A075B624 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.38■■□□□ 1.17
Trav15d-1-dv6d-1A0A075B624 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trav15d-1-dv6d-1A0A075B624 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Trav15d-1-dv6d-1A0A075B624 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trav15d-1-dv6d-1A0A075B624 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.3■■□□□ 1.16
Trav15d-1-dv6d-1A0A075B624 Rab21-202ENSMUST00000218831 843 ntBASIC22.3■■□□□ 1.16
Trav15d-1-dv6d-1A0A075B624 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trav15d-1-dv6d-1A0A075B624 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trav15d-1-dv6d-1A0A075B624 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trav15d-1-dv6d-1A0A075B624 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.27■■□□□ 1.16
Trav15d-1-dv6d-1A0A075B624 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.26■■□□□ 1.15
Trav15d-1-dv6d-1A0A075B624 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trav15d-1-dv6d-1A0A075B624 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trav15d-1-dv6d-1A0A075B624 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trav15d-1-dv6d-1A0A075B624 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.24■■□□□ 1.15
Trav15d-1-dv6d-1A0A075B624 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trav15d-1-dv6d-1A0A075B624 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trav15d-1-dv6d-1A0A075B624 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Trav15d-1-dv6d-1A0A075B624 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Trav15d-1-dv6d-1A0A075B624 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trav15d-1-dv6d-1A0A075B624 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trav15d-1-dv6d-1A0A075B624 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Trav15d-1-dv6d-1A0A075B624 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trav15d-1-dv6d-1A0A075B624 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trav15d-1-dv6d-1A0A075B624 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trav15d-1-dv6d-1A0A075B624 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trav15d-1-dv6d-1A0A075B624 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trav15d-1-dv6d-1A0A075B624 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trav15d-1-dv6d-1A0A075B624 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
Trav15d-1-dv6d-1A0A075B624 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trav15d-1-dv6d-1A0A075B624 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.12■■□□□ 1.13
Trav15d-1-dv6d-1A0A075B624 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trav15d-1-dv6d-1A0A075B624 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trav15d-1-dv6d-1A0A075B624 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.1■■□□□ 1.13
Trav15d-1-dv6d-1A0A075B624 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trav15d-1-dv6d-1A0A075B624 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trav15d-1-dv6d-1A0A075B624 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav15d-1-dv6d-1A0A075B624 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Trav15d-1-dv6d-1A0A075B624 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav15d-1-dv6d-1A0A075B624 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Trav15d-1-dv6d-1A0A075B624 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trav15d-1-dv6d-1A0A075B624 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms