Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 HNRNPA3P5-201ENST00000455201 833 ntBASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 AC003101.2-201ENST00000612557 442 ntBASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 AC018529.1-201ENST00000613063 361 ntBASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 AC243562.2-201ENST00000561247 970 ntBASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 AL138828.2-201ENST00000615812 383 ntBASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB1Q9Y5F3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 AP005117.1-202ENST00000581724 1908 ntBASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 SPTLC1P1-201ENST00000447199 261 ntBASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 RARRES2P9-201ENST00000565168 469 ntBASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 AL359881.2-201ENST00000602973 570 ntBASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHB1Q9Y5F3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms