Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 LINC02199-201ENST00000506655 2702 ntBASIC19.18■□□□□ 0.66
RFX7Q2KHR2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX7Q2KHR2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 AL607033.1-201ENST00000623900 1599 ntBASIC19.16■□□□□ 0.66
RFX7Q2KHR2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 AL512384.1-201ENST00000406683 331 ntBASIC19.16■□□□□ 0.66
RFX7Q2KHR2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 AC074338.1-201ENST00000416825 156 ntBASIC19.16■□□□□ 0.66
RFX7Q2KHR2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 TARDBPP1-201ENST00000442013 1203 ntBASIC19.16■□□□□ 0.66
RFX7Q2KHR2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX7Q2KHR2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms