Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.25□□□□□ -0.77
Efnb3O35393 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.25□□□□□ -0.77
Efnb3O35393 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Efnb3O35393 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Efnb3O35393 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.25□□□□□ -0.77
Efnb3O35393 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.25□□□□□ -0.77
Efnb3O35393 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.25□□□□□ -0.77
Efnb3O35393 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Efnb3O35393 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Efnb3O35393 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.25□□□□□ -0.77
Efnb3O35393 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.25□□□□□ -0.77
Efnb3O35393 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.25□□□□□ -0.77
Efnb3O35393 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.25□□□□□ -0.77
Efnb3O35393 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.25□□□□□ -0.77
Efnb3O35393 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Efnb3O35393 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Efnb3O35393 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.24□□□□□ -0.77
Efnb3O35393 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.24□□□□□ -0.77
Efnb3O35393 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.24□□□□□ -0.77
Efnb3O35393 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.24□□□□□ -0.77
Efnb3O35393 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Mir7684-201ENSMUST00000183858 60 ntBASIC10.24□□□□□ -0.77
Efnb3O35393 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Efnb3O35393 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Efnb3O35393 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.24□□□□□ -0.77
Efnb3O35393 Gm9063-201ENSMUST00000223299 582 ntBASIC10.24□□□□□ -0.77
Efnb3O35393 Gm24447-201ENSMUST00000083977 338 ntBASIC10.24□□□□□ -0.77
Efnb3O35393 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Efnb3O35393 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.24□□□□□ -0.77
Efnb3O35393 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.24□□□□□ -0.77
Efnb3O35393 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Efnb3O35393 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.24□□□□□ -0.77
Efnb3O35393 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Efnb3O35393 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Efnb3O35393 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms