Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 HIST3H2BA-201ENST00000436555 524 ntBASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 USP32P1-208ENST00000506594 1164 ntBASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 AC233724.13-201ENST00000598383 410 ntBASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 U82695.1-201ENST00000635752 1889 ntBASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 AC018665.1-201ENST00000622927 1362 ntBASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 SLC25A47P1-201ENST00000531577 414 ntBASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 AL583810.1-201ENST00000553344 1045 ntBASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 AC084346.2-201ENST00000607097 949 ntBASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 AL133338.1-201ENST00000565695 1517 ntBASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC46A1Q96NT5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms