Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 AC092474.2-201ENST00000424288 719 ntBASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 RHOQP3-201ENST00000437982 621 ntBASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 AC116407.3-201ENST00000623905 1129 ntBASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 AC007064.4-201ENST00000637740 555 ntBASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 TNRC18P2-201ENST00000417666 2714 ntBASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.68□□□□□ -0.06
SMARCD3Q6STE5 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 AC023141.13-201ENST00000604991 943 ntBASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.67□□□□□ -0.06
SMARCD3Q6STE5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 AC136621.1-201ENST00000624017 2304 ntBASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMARCD3Q6STE5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms