Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
CLDN8P56748 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CLDN8P56748 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLDN8P56748 AC018892.3-201ENST00000623986 2499 ntBASIC15.24■□□□□ 0.03
CLDN8P56748 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN8P56748 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CLDN8P56748 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN8P56748 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CLDN8P56748 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN8P56748 TFAMP1-201ENST00000412727 736 ntBASIC15.24■□□□□ 0.03
CLDN8P56748 AC142381.1-201ENST00000426099 345 ntBASIC15.24■□□□□ 0.03
CLDN8P56748 AL671277.1-201ENST00000429656 993 ntBASIC15.24■□□□□ 0.03
CLDN8P56748 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.24■□□□□ 0.03
CLDN8P56748 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN8P56748 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN8P56748 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN8P56748 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.24■□□□□ 0.03
CLDN8P56748 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN8P56748 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN8P56748 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN8P56748 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN8P56748 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLDN8P56748 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLDN8P56748 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN8P56748 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN8P56748 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLDN8P56748 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLDN8P56748 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN8P56748 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CLDN8P56748 FAM220BP-201ENST00000377689 816 ntBASIC15.23■□□□□ 0.03
CLDN8P56748 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.23■□□□□ 0.03
CLDN8P56748 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 AL355306.1-201ENST00000415580 579 ntBASIC15.23■□□□□ 0.03
CLDN8P56748 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 RPS8P6-201ENST00000426177 609 ntBASIC15.23■□□□□ 0.03
CLDN8P56748 KRT18P3-201ENST00000451602 1288 ntBASIC15.23■□□□□ 0.03
CLDN8P56748 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN8P56748 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.23■□□□□ 0.03
CLDN8P56748 AL135744.1-201ENST00000565098 629 ntBASIC15.23■□□□□ 0.03
CLDN8P56748 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CLDN8P56748 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN8P56748 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CLDN8P56748 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN8P56748 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN8P56748 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms