Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 RPS8P6-201ENST00000426177 609 ntBASIC15.22■□□□□ 0.03
PTPN6P29350 ADH5P3-201ENST00000433842 1137 ntBASIC15.22■□□□□ 0.03
PTPN6P29350 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.22■□□□□ 0.03
PTPN6P29350 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.22■□□□□ 0.03
PTPN6P29350 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PTPN6P29350 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN6P29350 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.22■□□□□ 0.03
PTPN6P29350 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 AC079781.4-201ENST00000641908 219 ntBASIC15.22■□□□□ 0.03
PTPN6P29350 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN6P29350 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PTPN6P29350 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN6P29350 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN6P29350 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN6P29350 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN6P29350 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN6P29350 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN6P29350 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.21■□□□□ 0.03
PTPN6P29350 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.21■□□□□ 0.03
PTPN6P29350 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN6P29350 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.21■□□□□ 0.03
PTPN6P29350 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN6P29350 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN6P29350 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
PTPN6P29350 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN6P29350 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN6P29350 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN6P29350 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN6P29350 AL355306.1-201ENST00000415580 579 ntBASIC15.21■□□□□ 0.03
PTPN6P29350 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.21■□□□□ 0.03
PTPN6P29350 DNAJB3-202ENST00000449667 1266 ntBASIC15.21■□□□□ 0.03
PTPN6P29350 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PTPN6P29350 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN6P29350 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PTPN6P29350 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PTPN6P29350 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN6P29350 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN6P29350 AL161645.1-201ENST00000622716 1255 ntBASIC15.21■□□□□ 0.03
PTPN6P29350 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN6P29350 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.21■□□□□ 0.03
PTPN6P29350 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.21■□□□□ 0.03
PTPN6P29350 AC138035.3-201ENST00000622706 2791 ntBASIC15.21■□□□□ 0.03
PTPN6P29350 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN6P29350 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN6P29350 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PTPN6P29350 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN6P29350 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN6P29350 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN6P29350 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN6P29350 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN6P29350 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN6P29350 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.21■□□□□ 0.02
PTPN6P29350 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.21■□□□□ 0.02
PTPN6P29350 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN6P29350 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
PTPN6P29350 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN6P29350 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN6P29350 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 WASH6P-202ENST00000359512 1437 ntBASIC15.2■□□□□ 0.02
PTPN6P29350 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
PTPN6P29350 AC254562.1-201ENST00000417586 456 ntBASIC15.2■□□□□ 0.02
PTPN6P29350 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN6P29350 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN6P29350 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.2■□□□□ 0.02
PTPN6P29350 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.2■□□□□ 0.02
PTPN6P29350 PRYP6-201ENST00000514804 343 ntBASIC15.2■□□□□ 0.02
PTPN6P29350 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.2■□□□□ 0.02
PTPN6P29350 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
PTPN6P29350 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 AP001160.2-201ENST00000596071 487 ntBASIC15.2■□□□□ 0.02
PTPN6P29350 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms