Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.1■□□□□ 0.33
O00370 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
O00370 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
O00370 AC099063.4-201ENST00000641099 1602 ntBASIC17.1■□□□□ 0.33
O00370 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
O00370 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.1■□□□□ 0.33
O00370 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.09■□□□□ 0.33
O00370 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.09■□□□□ 0.33
O00370 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
O00370 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.09■□□□□ 0.33
O00370 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.09■□□□□ 0.33
O00370 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
O00370 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
O00370 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
O00370 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 CNN2P2-201ENST00000443536 909 ntBASIC17.09■□□□□ 0.33
O00370 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.09■□□□□ 0.33
O00370 CNN2P3-201ENST00000450201 906 ntBASIC17.09■□□□□ 0.33
O00370 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.09■□□□□ 0.33
O00370 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.09■□□□□ 0.33
O00370 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.09■□□□□ 0.33
O00370 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 AL133215.2-201ENST00000609242 977 ntBASIC17.09■□□□□ 0.33
O00370 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.09■□□□□ 0.33
O00370 AL136317.3-201ENST00000618497 906 ntBASIC17.09■□□□□ 0.33
O00370 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.09■□□□□ 0.33
O00370 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 CYP4F24P-201ENST00000586049 1580 ntBASIC17.09■□□□□ 0.33
O00370 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
O00370 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.09■□□□□ 0.33
O00370 AC134407.2-201ENST00000625089 1978 ntBASIC17.09■□□□□ 0.33
O00370 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
O00370 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.09■□□□□ 0.33
O00370 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
O00370 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.08■□□□□ 0.33
O00370 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.08■□□□□ 0.33
O00370 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
O00370 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
O00370 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
O00370 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.08■□□□□ 0.33
O00370 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
O00370 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
O00370 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
O00370 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.08■□□□□ 0.33
O00370 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.08■□□□□ 0.33
O00370 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
O00370 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
O00370 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
O00370 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
O00370 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
O00370 AL035456.1-201ENST00000456064 1369 ntBASIC17.08■□□□□ 0.32
O00370 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
O00370 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.08■□□□□ 0.32
O00370 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
O00370 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.08■□□□□ 0.32
O00370 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
O00370 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.08■□□□□ 0.32
O00370 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.08■□□□□ 0.32
O00370 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.08■□□□□ 0.32
O00370 AC243562.2-201ENST00000561247 970 ntBASIC17.08■□□□□ 0.32
O00370 AC051619.7-201ENST00000568314 623 ntBASIC17.08■□□□□ 0.32
O00370 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.08■□□□□ 0.32
O00370 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
O00370 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
O00370 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
O00370 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
O00370 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.08■□□□□ 0.32
O00370 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
O00370 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
O00370 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.08■□□□□ 0.32
O00370 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
O00370 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
O00370 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
O00370 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.07■□□□□ 0.32
O00370 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms