Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 ELP5-212ENST00000574255 671 ntTSL 2 BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 NUDT4P2-201ENST00000578341 546 ntBASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 MIR5001-201ENST00000580185 100 ntBASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RIMBP3Q9UFD9 AC239868.1-201ENST00000369385 493 ntBASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 KRT8P21-201ENST00000430398 1491 ntBASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 KRT8P14-201ENST00000414254 1442 ntBASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 AL139094.1-201ENST00000405549 1188 ntBASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 AC093909.3-201ENST00000504783 336 ntBASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 HNRNPA1P36-201ENST00000521313 955 ntBASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
RIMBP3Q9UFD9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 RHBDF1P1-201ENST00000427504 1941 ntBASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 AC084752.1-201ENST00000509766 622 ntBASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 AC087392.5-201ENST00000612517 489 ntBASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RIMBP3Q9UFD9 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 AP000358.1-201ENST00000456260 156 ntBASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 AP003398.1-201ENST00000531124 318 ntBASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 NAT9-220ENST00000582870 896 ntTSL 5 BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
RIMBP3Q9UFD9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 HNRNPA1P42-201ENST00000458678 957 ntBASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 FAM86B3P-203ENST00000523992 854 ntBASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 AC012073.1-201ENST00000606114 1108 ntBASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 AL358472.3-201ENST00000608147 415 ntBASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 CMC2-224ENST00000630396 481 ntTSL 5 BASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RIMBP3Q9UFD9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
RIMBP3Q9UFD9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.52
RIMBP3Q9UFD9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
RIMBP3Q9UFD9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RIMBP3Q9UFD9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
RIMBP3Q9UFD9 AL138688.1-201ENST00000624851 1594 ntBASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms