Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 CNN2P10-201ENST00000443067 918 ntBASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 HIST2H2BC-201ENST00000498492 580 ntBASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 AC105129.2-201ENST00000559536 390 ntBASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 RN7SL48P-201ENST00000579283 293 ntBASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 ECM1P1-201ENST00000604092 1279 ntBASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 BCL2-203ENST00000589955 5011 ntBASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 RNU1-114P-201ENST00000365297 166 ntBASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 AC005077.2-201ENST00000449786 690 ntBASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 AC015967.2-201ENST00000624092 234 ntBASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 AC006435.4-201ENST00000625037 234 ntBASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 AL356737.1-201ENST00000634391 234 ntBASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CNTNAP4Q9C0A0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.83■□□□□ 0.76
CNTNAP4Q9C0A0 ALOX12P2-203ENST00000570921 1945 ntBASIC19.83■□□□□ 0.76
CNTNAP4Q9C0A0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTNAP4Q9C0A0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTNAP4Q9C0A0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTNAP4Q9C0A0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTNAP4Q9C0A0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CNTNAP4Q9C0A0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTNAP4Q9C0A0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 KLF2P2-201ENST00000416807 1039 ntBASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 HSPB1P2-201ENST00000448722 546 ntBASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP4Q9C0A0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP4Q9C0A0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP4Q9C0A0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
CNTNAP4Q9C0A0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP4Q9C0A0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CNTNAP4Q9C0A0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP4Q9C0A0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.81■□□□□ 0.76
CNTNAP4Q9C0A0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CNTNAP4Q9C0A0 FNTAP2-201ENST00000430308 634 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms