Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 MIR33B-201ENST00000385104 96 ntBASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 CYP46A4P-201ENST00000414953 267 ntBASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 POU5F1P6-201ENST00000466990 990 ntBASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 AL450472.2-201ENST00000603663 1156 ntBASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 AC097359.3-201ENST00000603982 1210 ntBASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 KRT8P35-201ENST00000483942 1338 ntBASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 REXO1L1P-202ENST00000608646 1974 ntBASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM43Q96BQ3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 CD8B2-202ENST00000417670 633 ntBASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 POM121L10P-201ENST00000436994 1285 ntBASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 AC126915.1-201ENST00000522847 1038 ntBASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM43Q96BQ3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 AC091812.3-201ENST00000621362 345 ntBASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM43Q96BQ3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms