Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 AC010491.1-201ENST00000563101 2797 ntBASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 MRPS18AP1-201ENST00000414458 589 ntBASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 AC136604.1-201ENST00000418535 575 ntBASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 AC044860.1-202ENST00000559481 777 ntBASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 PCDHA1-201ENST00000378133 2726 ntBASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 Z97205.2-201ENST00000564697 1639 ntBASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 AC074044.1-201ENST00000609673 707 ntBASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAM1L1Q8N609 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 AC018892.3-201ENST00000623986 2499 ntBASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms