Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 MIR3909-201ENST00000579518 119 ntBASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.01□□□□□ -0.17
ATPAF1Q5TC12 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14□□□□□ -0.17
ATPAF1Q5TC12 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 KRT8P39-201ENST00000396270 1433 ntBASIC14□□□□□ -0.17
ATPAF1Q5TC12 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 HMGA1P7-201ENST00000406908 502 ntBASIC14□□□□□ -0.17
ATPAF1Q5TC12 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 KRT19P2-202ENST00000557173 1012 ntBASIC14□□□□□ -0.17
ATPAF1Q5TC12 AC040169.1-201ENST00000565382 521 ntBASIC14□□□□□ -0.17
ATPAF1Q5TC12 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 MED16-214ENST00000617672 554 ntTSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATPAF1Q5TC12 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
ATPAF1Q5TC12 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms