Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 RNA5SP415-201ENST00000517246 115 ntBASIC17.09■□□□□ 0.33
RCCD1A6NED2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 AL031008.1-201ENST00000619963 541 ntBASIC17.09■□□□□ 0.33
RCCD1A6NED2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCCD1A6NED2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RCCD1A6NED2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RCCD1A6NED2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RCCD1A6NED2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RCCD1A6NED2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RCCD1A6NED2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RCCD1A6NED2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RCCD1A6NED2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RCCD1A6NED2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCCD1A6NED2 BNIP3P1-202ENST00000550043 1585 ntBASIC17.08■□□□□ 0.32
RCCD1A6NED2 FOXO1B-201ENST00000504678 1527 ntBASIC17.08■□□□□ 0.32
RCCD1A6NED2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RCCD1A6NED2 KRT8P44-201ENST00000441609 1350 ntBASIC17.08■□□□□ 0.32
RCCD1A6NED2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RCCD1A6NED2 AL031284.1-201ENST00000419297 478 ntBASIC17.08■□□□□ 0.32
RCCD1A6NED2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RCCD1A6NED2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 PRYP6-201ENST00000514804 343 ntBASIC17.08■□□□□ 0.32
RCCD1A6NED2 IGHV3-22-201ENST00000520721 359 ntBASIC17.08■□□□□ 0.32
RCCD1A6NED2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 AL138918.1-201ENST00000568306 659 ntBASIC17.08■□□□□ 0.32
RCCD1A6NED2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 AC104692.2-201ENST00000603054 253 ntBASIC17.08■□□□□ 0.32
RCCD1A6NED2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCCD1A6NED2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCCD1A6NED2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCCD1A6NED2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCCD1A6NED2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCCD1A6NED2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.08■□□□□ 0.32
RCCD1A6NED2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 PMS2P7-201ENST00000506558 1336 ntBASIC17.07■□□□□ 0.32
RCCD1A6NED2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms