Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 FAM45BP-202ENST00000592932 1624 ntBASIC14.41□□□□□ -0.1
COPS3Q9UNS2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 HAUS4P1-201ENST00000406739 1145 ntBASIC14.4□□□□□ -0.1
COPS3Q9UNS2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 AF186996.4-201ENST00000467186 377 ntBASIC14.4□□□□□ -0.1
COPS3Q9UNS2 AC108751.1-201ENST00000490852 363 ntBASIC14.4□□□□□ -0.1
COPS3Q9UNS2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 AL121912.1-201ENST00000603683 238 ntBASIC14.4□□□□□ -0.1
COPS3Q9UNS2 AL645728.2-201ENST00000641974 660 ntBASIC14.4□□□□□ -0.1
COPS3Q9UNS2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 AC020658.6-201ENST00000623564 1870 ntBASIC14.4□□□□□ -0.1
COPS3Q9UNS2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
COPS3Q9UNS2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 IGLL3P-201ENST00000412472 434 ntBASIC14.39□□□□□ -0.11
COPS3Q9UNS2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 PRSS29P-201ENST00000440800 595 ntBASIC14.39□□□□□ -0.11
COPS3Q9UNS2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 AC092910.1-201ENST00000482027 1129 ntBASIC14.39□□□□□ -0.11
COPS3Q9UNS2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 AP002469.2-201ENST00000531724 424 ntBASIC14.39□□□□□ -0.11
COPS3Q9UNS2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS3Q9UNS2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms