Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 TSEN15P1-201ENST00000423257 515 ntBASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 RARRES2P9-201ENST00000565168 469 ntBASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 MTHFR-217ENST00000641820 1569 ntBASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 FLJ16779-201ENST00000612722 7638 ntBASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 AL139400.1-201ENST00000366220 510 ntBASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 SPDYE14P-201ENST00000442619 822 ntBASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 AC026150.2-201ENST00000564693 1156 ntBASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 AC061975.2-201ENST00000581722 295 ntBASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 AL365203.3-201ENST00000609742 2057 ntBASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.8■□□□□ 0.28
PPARGC1AQ9UBK2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 MIR4321-201ENST00000592276 80 ntBASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 LINC00628-201ENST00000628516 1289 ntBASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PPARGC1AQ9UBK2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms