Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 U91328.1-201ENST00000437528 223 ntBASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 AC007274.1-201ENST00000439805 662 ntBASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 KRT17P7-201ENST00000451704 1104 ntBASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 AC135586.1-201ENST00000539323 574 ntBASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 CDC14C-201ENST00000428251 1719 ntBASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 AC093004.1-201ENST00000508850 424 ntBASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPAP1Q9BWH6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 AC098614.1-201ENST00000368528 745 ntBASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 MIR648-201ENST00000385046 94 ntBASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 SERBP1P3-201ENST00000459980 809 ntBASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RPAP1Q9BWH6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 AC112504.1-201ENST00000623415 1841 ntBASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms