Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 AC008494.3-201ENST00000606615 944 ntBASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 LINC02447-202ENST00000501888 2146 ntBASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 SLED1-202ENST00000512051 380 ntBASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 AC007431.3-201ENST00000623221 587 ntBASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 AL158212.4-201ENST00000624062 1286 ntBASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NEDD1Q8NHV4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 AC112504.1-201ENST00000623415 1841 ntBASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 COX5BP8-201ENST00000416911 349 ntBASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 AC098850.1-201ENST00000419919 790 ntBASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 NME2P1-201ENST00000426182 414 ntBASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 GAPDHP21-201ENST00000450301 1010 ntBASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 WASH4P-201ENST00000564273 1246 ntBASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 MIR4313-201ENST00000580760 101 ntBASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 AC093726.1-201ENST00000608064 963 ntBASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 AL603832.2-201ENST00000566195 2125 ntBASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.59■□□□□ 0.57
NEDD1Q8NHV4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms