Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 AC211486.1-202ENST00000416371 468 ntBASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 AC211476.1-201ENST00000503899 468 ntBASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 SLC25A39P2-201ENST00000537614 270 ntBASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 AC027796.2-201ENST00000575326 344 ntBASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 AP001160.2-201ENST00000596071 487 ntBASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 AC134684.3-201ENST00000641758 218 ntBASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIMC1Q8NDZ2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SIMC1Q8NDZ2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SIMC1Q8NDZ2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SIMC1Q8NDZ2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.21■□□□□ 0.02
SIMC1Q8NDZ2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SIMC1Q8NDZ2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SIMC1Q8NDZ2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SIMC1Q8NDZ2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.21■□□□□ 0.02
SIMC1Q8NDZ2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SIMC1Q8NDZ2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 AC105233.2-201ENST00000523697 349 ntBASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 AF228730.5-201ENST00000530288 346 ntBASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 UXT-AS1-201ENST00000590504 1525 ntBASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms