Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 AC092580.3-201ENST00000430932 139 ntBASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 MIR3909-201ENST00000579518 119 ntBASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 AC020765.3-201ENST00000613051 740 ntBASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 AC008761.3-201ENST00000624803 892 ntBASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC33Q8N5R6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 AC003101.2-201ENST00000612557 442 ntBASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC33Q8N5R6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 AC024909.3-201ENST00000611513 2257 ntBASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms