Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HERC6Q8IVU3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 PFN1P12-201ENST00000455938 534 ntBASIC17.33■□□□□ 0.36
HERC6Q8IVU3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 AL359711.2-201ENST00000563105 872 ntBASIC17.33■□□□□ 0.36
HERC6Q8IVU3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 AP001094.4-201ENST00000579008 2176 ntBASIC17.33■□□□□ 0.36
HERC6Q8IVU3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC6Q8IVU3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 AP000812.2-201ENST00000538934 718 ntBASIC17.32■□□□□ 0.36
HERC6Q8IVU3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 MIR4321-201ENST00000592276 80 ntBASIC17.32■□□□□ 0.36
HERC6Q8IVU3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 GGT4P-201ENST00000623672 1708 ntBASIC17.32■□□□□ 0.36
HERC6Q8IVU3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HERC6Q8IVU3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HERC6Q8IVU3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms