Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 RARRES2P8-201ENST00000566335 367 ntBASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 AC144831.1-201ENST00000573312 2656 ntBASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LINC00346Q8IVM7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC00346Q8IVM7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 AC091812.2-201ENST00000619081 385 ntBASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LINC00346Q8IVM7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 FAM58CP-201ENST00000435741 640 ntBASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms