Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP46P62068 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP46P62068 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.93■□□□□ 0.3
USP46P62068 SPTLC1P1-201ENST00000447199 261 ntBASIC16.93■□□□□ 0.3
USP46P62068 RN7SL618P-201ENST00000477850 296 ntBASIC16.93■□□□□ 0.3
USP46P62068 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.93■□□□□ 0.3
USP46P62068 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.93■□□□□ 0.3
USP46P62068 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP46P62068 AC044860.1-202ENST00000559481 777 ntBASIC16.93■□□□□ 0.3
USP46P62068 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
USP46P62068 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.93■□□□□ 0.3
USP46P62068 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.93■□□□□ 0.3
USP46P62068 AL662844.4-201ENST00000606367 2838 ntBASIC16.93■□□□□ 0.3
USP46P62068 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
USP46P62068 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP46P62068 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP46P62068 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
USP46P62068 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP46P62068 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP46P62068 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
USP46P62068 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP46P62068 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP46P62068 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP46P62068 CROCCP1-201ENST00000426910 5675 ntBASIC16.93■□□□□ 0.3
USP46P62068 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP46P62068 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
USP46P62068 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.93■□□□□ 0.3
USP46P62068 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.93■□□□□ 0.3
USP46P62068 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.93■□□□□ 0.3
USP46P62068 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
USP46P62068 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.92■□□□□ 0.3
USP46P62068 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.92■□□□□ 0.3
USP46P62068 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
USP46P62068 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.92■□□□□ 0.3
USP46P62068 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.92■□□□□ 0.3
USP46P62068 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
USP46P62068 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
USP46P62068 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 AC023824.1-201ENST00000562945 2975 ntBASIC16.92■□□□□ 0.3
USP46P62068 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.92■□□□□ 0.3
USP46P62068 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.92■□□□□ 0.3
USP46P62068 AC004790.1-201ENST00000612686 536 ntBASIC16.92■□□□□ 0.3
USP46P62068 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
USP46P62068 AL033527.5-202ENST00000641632 1098 ntBASIC16.92■□□□□ 0.3
USP46P62068 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.92■□□□□ 0.3
USP46P62068 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.92■□□□□ 0.3
USP46P62068 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.92■□□□□ 0.3
USP46P62068 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
USP46P62068 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.92■□□□□ 0.3
USP46P62068 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.92■□□□□ 0.3
USP46P62068 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.92■□□□□ 0.3
USP46P62068 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP46P62068 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.92■□□□□ 0.3
USP46P62068 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
USP46P62068 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
USP46P62068 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
USP46P62068 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 HIST3H2BA-201ENST00000436555 524 ntBASIC16.91■□□□□ 0.3
USP46P62068 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.91■□□□□ 0.3
USP46P62068 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.91■□□□□ 0.3
USP46P62068 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.91■□□□□ 0.3
USP46P62068 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.91■□□□□ 0.3
USP46P62068 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.91■□□□□ 0.3
USP46P62068 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 AC009118.2-201ENST00000613275 655 ntBASIC16.91■□□□□ 0.3
USP46P62068 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
USP46P62068 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
USP46P62068 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms