Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PRORSD1P-202ENST00000563365 2154 ntBASIC17.58■□□□□ 0.4
CLCN3P51790 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCN3P51790 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCN3P51790 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLCN3P51790 INE1-201ENST00000456273 945 ntBASIC17.58■□□□□ 0.4
CLCN3P51790 ELK1P1-201ENST00000485699 580 ntBASIC17.58■□□□□ 0.4
CLCN3P51790 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCN3P51790 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCN3P51790 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CLCN3P51790 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.58■□□□□ 0.4
CLCN3P51790 CTBP2P3-201ENST00000585629 1255 ntBASIC17.58■□□□□ 0.4
CLCN3P51790 AC099568.2-201ENST00000609194 695 ntBASIC17.58■□□□□ 0.4
CLCN3P51790 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.58■□□□□ 0.4
CLCN3P51790 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
CLCN3P51790 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCN3P51790 AC018892.3-201ENST00000623986 2499 ntBASIC17.58■□□□□ 0.4
CLCN3P51790 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CLCN3P51790 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CLCN3P51790 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN3P51790 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CLCN3P51790 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CLCN3P51790 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCN3P51790 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCN3P51790 KRT18P64-201ENST00000434946 1219 ntBASIC17.57■□□□□ 0.4
CLCN3P51790 RN7SL752P-201ENST00000463779 287 ntBASIC17.57■□□□□ 0.4
CLCN3P51790 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCN3P51790 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCN3P51790 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.57■□□□□ 0.4
CLCN3P51790 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCN3P51790 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.57■□□□□ 0.4
CLCN3P51790 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.57■□□□□ 0.4
CLCN3P51790 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCN3P51790 AC093726.1-201ENST00000608064 963 ntBASIC17.57■□□□□ 0.4
CLCN3P51790 MIR8072-201ENST00000614241 80 ntBASIC17.57■□□□□ 0.4
CLCN3P51790 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLCN3P51790 IGHV3-72-202ENST00000621503 303 ntBASIC17.57■□□□□ 0.4
CLCN3P51790 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCN3P51790 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLCN3P51790 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCN3P51790 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLCN3P51790 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN3P51790 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCN3P51790 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN3P51790 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLCN3P51790 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLCN3P51790 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CLCN3P51790 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN3P51790 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.56■□□□□ 0.4
CLCN3P51790 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN3P51790 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
CLCN3P51790 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.56■□□□□ 0.4
CLCN3P51790 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.56■□□□□ 0.4
CLCN3P51790 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.56■□□□□ 0.4
CLCN3P51790 PHKG1P2-201ENST00000457537 863 ntBASIC17.56■□□□□ 0.4
CLCN3P51790 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN3P51790 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.56■□□□□ 0.4
CLCN3P51790 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms