Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.59□□□□□ -0.39
CD28P10747 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.59□□□□□ -0.39
CD28P10747 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.59□□□□□ -0.39
CD28P10747 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.59□□□□□ -0.39
CD28P10747 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
CD28P10747 DFFBP1-201ENST00000433250 979 ntBASIC12.59□□□□□ -0.39
CD28P10747 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CD28P10747 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.59□□□□□ -0.39
CD28P10747 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.59□□□□□ -0.39
CD28P10747 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.59□□□□□ -0.39
CD28P10747 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.59□□□□□ -0.39
CD28P10747 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.59□□□□□ -0.39
CD28P10747 AC004790.1-201ENST00000612686 536 ntBASIC12.59□□□□□ -0.39
CD28P10747 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.59□□□□□ -0.39
CD28P10747 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.59□□□□□ -0.39
CD28P10747 CU639417.3-201ENST00000624240 1404 ntBASIC12.59□□□□□ -0.39
CD28P10747 AL365209.1-201ENST00000624418 6473 ntBASIC12.59□□□□□ -0.39
CD28P10747 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CD28P10747 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.59□□□□□ -0.39
CD28P10747 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CD28P10747 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 AC138969.3-201ENST00000546612 1459 ntBASIC12.59□□□□□ -0.39
CD28P10747 AC138932.2-201ENST00000548268 1459 ntBASIC12.59□□□□□ -0.39
CD28P10747 AC126755.4-201ENST00000549796 1459 ntBASIC12.59□□□□□ -0.39
CD28P10747 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CD28P10747 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
CD28P10747 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CD28P10747 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.58□□□□□ -0.4
CD28P10747 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CD28P10747 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.58□□□□□ -0.4
CD28P10747 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.58□□□□□ -0.4
CD28P10747 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
CD28P10747 DGCR5-201ENST00000399539 862 ntBASIC12.58□□□□□ -0.4
CD28P10747 AC087499.6-201ENST00000411576 835 ntBASIC12.58□□□□□ -0.4
CD28P10747 SPDYE17-201ENST00000412399 783 ntBASIC12.58□□□□□ -0.4
CD28P10747 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.58□□□□□ -0.4
CD28P10747 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.58□□□□□ -0.4
CD28P10747 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.58□□□□□ -0.4
CD28P10747 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 UBALD1-205ENST00000590891 2641 ntBASIC12.58□□□□□ -0.4
CD28P10747 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.58□□□□□ -0.4
CD28P10747 MIR6069-201ENST00000620069 79 ntBASIC12.58□□□□□ -0.4
CD28P10747 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 AL109936.8-201ENST00000641772 604 ntBASIC12.58□□□□□ -0.4
CD28P10747 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.58□□□□□ -0.4
CD28P10747 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.58□□□□□ -0.4
CD28P10747 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.58□□□□□ -0.4
CD28P10747 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CD28P10747 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD28P10747 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.57□□□□□ -0.4
CD28P10747 GGT3P-204ENST00000453783 1664 ntBASIC12.57□□□□□ -0.4
CD28P10747 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms