Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
GGPS1O95749 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18■□□□□ 0.47
GGPS1O95749 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18■□□□□ 0.47
GGPS1O95749 BNIP3P1-202ENST00000550043 1585 ntBASIC18■□□□□ 0.47
GGPS1O95749 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.99■□□□□ 0.47
GGPS1O95749 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
GGPS1O95749 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
GGPS1O95749 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
GGPS1O95749 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
GGPS1O95749 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
GGPS1O95749 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
GGPS1O95749 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
GGPS1O95749 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.99■□□□□ 0.47
GGPS1O95749 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.99■□□□□ 0.47
GGPS1O95749 MYCLP2-201ENST00000449268 967 ntBASIC17.99■□□□□ 0.47
GGPS1O95749 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 MEIS3P1-201ENST00000495167 958 ntBASIC17.99■□□□□ 0.47
GGPS1O95749 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
GGPS1O95749 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.99■□□□□ 0.47
GGPS1O95749 AC123567.1-201ENST00000548294 1261 ntBASIC17.99■□□□□ 0.47
GGPS1O95749 AC099568.2-201ENST00000609194 695 ntBASIC17.99■□□□□ 0.47
GGPS1O95749 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.99■□□□□ 0.47
GGPS1O95749 IGHV3-72-202ENST00000621503 303 ntBASIC17.99■□□□□ 0.47
GGPS1O95749 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.99■□□□□ 0.47
GGPS1O95749 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GGPS1O95749 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.99■□□□□ 0.47
GGPS1O95749 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.99■□□□□ 0.47
GGPS1O95749 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.99■□□□□ 0.47
GGPS1O95749 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
GGPS1O95749 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
GGPS1O95749 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 Z97205.2-201ENST00000564697 1639 ntBASIC17.98■□□□□ 0.47
GGPS1O95749 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
GGPS1O95749 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
GGPS1O95749 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.98■□□□□ 0.47
GGPS1O95749 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.98■□□□□ 0.47
GGPS1O95749 AC098850.1-201ENST00000419919 790 ntBASIC17.98■□□□□ 0.47
GGPS1O95749 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.98■□□□□ 0.47
GGPS1O95749 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
GGPS1O95749 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.98■□□□□ 0.47
GGPS1O95749 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.98■□□□□ 0.47
GGPS1O95749 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.98■□□□□ 0.47
GGPS1O95749 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.98■□□□□ 0.47
GGPS1O95749 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
GGPS1O95749 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.98■□□□□ 0.47
GGPS1O95749 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.98■□□□□ 0.47
GGPS1O95749 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
GGPS1O95749 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GGPS1O95749 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GGPS1O95749 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GGPS1O95749 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GGPS1O95749 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GGPS1O95749 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GGPS1O95749 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GGPS1O95749 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.97■□□□□ 0.47
GGPS1O95749 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
GGPS1O95749 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GGPS1O95749 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.97■□□□□ 0.47
GGPS1O95749 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GGPS1O95749 OR8S1-201ENST00000310194 1080 ntBASIC17.97■□□□□ 0.47
GGPS1O95749 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GGPS1O95749 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.97■□□□□ 0.47
GGPS1O95749 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GGPS1O95749 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.97■□□□□ 0.47
GGPS1O95749 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.97■□□□□ 0.47
GGPS1O95749 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GGPS1O95749 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GGPS1O95749 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
GGPS1O95749 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GGPS1O95749 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GGPS1O95749 LINC01115-203ENST00000606068 577 ntBASIC17.97■□□□□ 0.47
GGPS1O95749 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GGPS1O95749 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GGPS1O95749 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GGPS1O95749 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
GGPS1O95749 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms