Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.66■□□□□ 0.1
C4orf47A7E2U8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 AC124947.2-201ENST00000547118 1133 ntBASIC15.66■□□□□ 0.1
C4orf47A7E2U8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 AL391069.4-201ENST00000609583 481 ntBASIC15.66■□□□□ 0.1
C4orf47A7E2U8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 AL158212.4-201ENST00000624062 1286 ntBASIC15.66■□□□□ 0.1
C4orf47A7E2U8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 AC106886.4-201ENST00000623557 2502 ntBASIC15.66■□□□□ 0.1
C4orf47A7E2U8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C4orf47A7E2U8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 AC092053.1-201ENST00000605787 1936 ntBASIC15.65■□□□□ 0.1
C4orf47A7E2U8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 IGHJ2P-201ENST00000454480 60 ntBASIC15.65■□□□□ 0.1
C4orf47A7E2U8 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 FTH1P14-201ENST00000482930 551 ntBASIC15.65■□□□□ 0.1
C4orf47A7E2U8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 ENPP7P5-201ENST00000541031 1031 ntBASIC15.65■□□□□ 0.1
C4orf47A7E2U8 AC079316.1-201ENST00000548397 411 ntBASIC15.65■□□□□ 0.1
C4orf47A7E2U8 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 LINC02012-201ENST00000608206 1725 ntBASIC15.65■□□□□ 0.1
C4orf47A7E2U8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.65■□□□□ 0.1
C4orf47A7E2U8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
C4orf47A7E2U8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
C4orf47A7E2U8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
C4orf47A7E2U8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
C4orf47A7E2U8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C4orf47A7E2U8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.64■□□□□ 0.09
C4orf47A7E2U8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C4orf47A7E2U8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.64■□□□□ 0.09
C4orf47A7E2U8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.64■□□□□ 0.09
C4orf47A7E2U8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms