Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 RN7SL752P-201ENST00000463779 287 ntBASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 AC243562.2-201ENST00000561247 970 ntBASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 AC008494.3-201ENST00000606615 944 ntBASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 AC007431.3-201ENST00000623221 587 ntBASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 AC020916.1-201ENST00000587762 1774 ntBASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 AC063926.3-201ENST00000624734 5658 ntBASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTDP1Q9Y5B0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 AL592424.1-201ENST00000563624 1536 ntBASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 DGCR5-201ENST00000399539 862 ntBASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 AC074044.1-201ENST00000609673 707 ntBASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTDP1Q9Y5B0 SLC7A15P-201ENST00000424028 1363 ntBASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms