Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 KRT18P64-201ENST00000434946 1219 ntBASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 AC120045.2-201ENST00000567334 178 ntBASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 HLA-A-202ENST00000376806 1854 ntBASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CARMIL3Q8ND23 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 AC007551.1-201ENST00000457394 519 ntBASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 FTH1P14-201ENST00000482930 551 ntBASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 AC106760.1-201ENST00000508690 800 ntBASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 SLED1-202ENST00000512051 380 ntBASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 AC078925.2-201ENST00000624013 1973 ntBASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CARMIL3Q8ND23 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
CARMIL3Q8ND23 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.95■□□□□ 0.79
CARMIL3Q8ND23 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.95■□□□□ 0.79
CARMIL3Q8ND23 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
CARMIL3Q8ND23 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.95■□□□□ 0.79
CARMIL3Q8ND23 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
CARMIL3Q8ND23 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.95■□□□□ 0.79
CARMIL3Q8ND23 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.95■□□□□ 0.79
CARMIL3Q8ND23 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.79
CARMIL3Q8ND23 AC244669.2-201ENST00000612320 853 ntBASIC19.95■□□□□ 0.79
CARMIL3Q8ND23 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 FLJ38576-201ENST00000623820 2459 ntBASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 BNIP3P1-202ENST00000550043 1585 ntBASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 RNF216P1-203ENST00000404404 2427 ntBASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms