Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 AZGP1P1-201ENST00000411909 902 ntBASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 AL512638.1-201ENST00000457493 794 ntBASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 AC004890.2-204ENST00000481968 304 ntBASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 AL512361.1-201ENST00000554200 418 ntBASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 AL844908.2-201ENST00000609461 460 ntBASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 PHKG1P2-201ENST00000457537 863 ntBASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 ZNF890P-202ENST00000530367 1156 ntBASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 AC010336.2-201ENST00000564226 506 ntBASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 AL450472.2-201ENST00000603663 1156 ntBASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TRAM1L1Q8N609 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 AC009477.1-201ENST00000452936 217 ntBASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 INGX-202ENST00000489074 768 ntBASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 AC011467.4-201ENST00000594891 528 ntBASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAM1L1Q8N609 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms