Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
VTNP04004 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.56■□□□□ 0.4
VTNP04004 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
VTNP04004 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
VTNP04004 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 PCDH8P1-201ENST00000428983 2773 ntBASIC17.56■□□□□ 0.4
VTNP04004 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.56■□□□□ 0.4
VTNP04004 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.56■□□□□ 0.4
VTNP04004 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.56■□□□□ 0.4
VTNP04004 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.56■□□□□ 0.4
VTNP04004 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.56■□□□□ 0.4
VTNP04004 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VTNP04004 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.56■□□□□ 0.4
VTNP04004 AC093726.1-201ENST00000608064 963 ntBASIC17.56■□□□□ 0.4
VTNP04004 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
VTNP04004 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VTNP04004 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VTNP04004 AP001282.1-201ENST00000531301 1499 ntBASIC17.56■□□□□ 0.4
VTNP04004 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.56■□□□□ 0.4
VTNP04004 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.55■□□□□ 0.4
VTNP04004 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
VTNP04004 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.55■□□□□ 0.4
VTNP04004 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.55■□□□□ 0.4
VTNP04004 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.55■□□□□ 0.4
VTNP04004 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
VTNP04004 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.55■□□□□ 0.4
VTNP04004 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.55■□□□□ 0.4
VTNP04004 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.55■□□□□ 0.4
VTNP04004 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.55■□□□□ 0.4
VTNP04004 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.55■□□□□ 0.4
VTNP04004 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.55■□□□□ 0.4
VTNP04004 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
VTNP04004 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.55■□□□□ 0.4
VTNP04004 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VTNP04004 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VTNP04004 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VTNP04004 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VTNP04004 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.55■□□□□ 0.4
VTNP04004 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.55■□□□□ 0.4
VTNP04004 REXO1L1P-202ENST00000608646 1974 ntBASIC17.55■□□□□ 0.4
VTNP04004 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.55■□□□□ 0.4
VTNP04004 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
VTNP04004 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTNP04004 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.54■□□□□ 0.4
VTNP04004 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.54■□□□□ 0.4
VTNP04004 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.54■□□□□ 0.4
VTNP04004 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
VTNP04004 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 AL512384.1-201ENST00000406683 331 ntBASIC17.54■□□□□ 0.4
VTNP04004 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
VTNP04004 U91328.1-201ENST00000437528 223 ntBASIC17.54■□□□□ 0.4
VTNP04004 RPL13P2-201ENST00000440687 659 ntBASIC17.54■□□□□ 0.4
VTNP04004 GIMAP3P-201ENST00000495150 836 ntBASIC17.54■□□□□ 0.4
VTNP04004 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.54■□□□□ 0.4
VTNP04004 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VTNP04004 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.54■□□□□ 0.4
VTNP04004 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.54■□□□□ 0.4
VTNP04004 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.54■□□□□ 0.4
VTNP04004 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.54■□□□□ 0.4
VTNP04004 RARRES2P5-201ENST00000564013 466 ntBASIC17.54■□□□□ 0.4
VTNP04004 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
VTNP04004 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms