Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
XRCC2O43543 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
XRCC2O43543 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
XRCC2O43543 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.06□□□□□ -0.16
XRCC2O43543 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.06□□□□□ -0.16
XRCC2O43543 MIR940-201ENST00000401276 94 ntBASIC14.06□□□□□ -0.16
XRCC2O43543 TFAMP1-201ENST00000412727 736 ntBASIC14.06□□□□□ -0.16
XRCC2O43543 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.06□□□□□ -0.16
XRCC2O43543 MCCD1P2-201ENST00000423228 335 ntBASIC14.06□□□□□ -0.16
XRCC2O43543 ACTG1P14-201ENST00000446382 1122 ntBASIC14.06□□□□□ -0.16
XRCC2O43543 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.06□□□□□ -0.16
XRCC2O43543 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.06□□□□□ -0.16
XRCC2O43543 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.06□□□□□ -0.16
XRCC2O43543 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.06□□□□□ -0.16
XRCC2O43543 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.06□□□□□ -0.16
XRCC2O43543 AC024267.1-201ENST00000582320 895 ntBASIC14.06□□□□□ -0.16
XRCC2O43543 AC008267.7-201ENST00000624570 1194 ntBASIC14.06□□□□□ -0.16
XRCC2O43543 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
XRCC2O43543 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
XRCC2O43543 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.06□□□□□ -0.16
XRCC2O43543 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.06□□□□□ -0.16
XRCC2O43543 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 AP002414.2-201ENST00000591780 3365 ntBASIC14.06□□□□□ -0.16
XRCC2O43543 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
XRCC2O43543 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.06□□□□□ -0.16
XRCC2O43543 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
XRCC2O43543 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.06□□□□□ -0.16
XRCC2O43543 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
XRCC2O43543 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
XRCC2O43543 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.05□□□□□ -0.16
XRCC2O43543 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
XRCC2O43543 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
XRCC2O43543 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.05□□□□□ -0.16
XRCC2O43543 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.05□□□□□ -0.16
XRCC2O43543 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
XRCC2O43543 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.05□□□□□ -0.16
XRCC2O43543 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
XRCC2O43543 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
XRCC2O43543 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
XRCC2O43543 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.05□□□□□ -0.16
XRCC2O43543 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.05□□□□□ -0.16
XRCC2O43543 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.05□□□□□ -0.16
XRCC2O43543 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.05□□□□□ -0.16
XRCC2O43543 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
XRCC2O43543 AC098859.1-201ENST00000502915 1238 ntBASIC14.05□□□□□ -0.16
XRCC2O43543 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.05□□□□□ -0.16
XRCC2O43543 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.05□□□□□ -0.16
XRCC2O43543 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.05□□□□□ -0.16
XRCC2O43543 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.05□□□□□ -0.16
XRCC2O43543 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.05□□□□□ -0.16
XRCC2O43543 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
XRCC2O43543 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.05□□□□□ -0.16
XRCC2O43543 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.05□□□□□ -0.16
XRCC2O43543 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.05□□□□□ -0.16
XRCC2O43543 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.05□□□□□ -0.16
XRCC2O43543 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.05□□□□□ -0.16
XRCC2O43543 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
XRCC2O43543 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
XRCC2O43543 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
XRCC2O43543 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
XRCC2O43543 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms