Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 SLC22A20-204ENST00000530038 1673 ntBASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB6Q9Y5F9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 AC069262.1-201ENST00000539058 672 ntBASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 AC093512.1-201ENST00000617969 520 ntBASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 AC008267.7-201ENST00000624570 1194 ntBASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 AL645728.1-201ENST00000366221 2101 ntBASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB6Q9Y5F9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 AC063926.3-201ENST00000624734 5658 ntBASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB6Q9Y5F9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms