Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 INE1-201ENST00000456273 945 ntBASIC21.85■■□□□ 1.09
NINLQ9Y2I6 PACS1-203ENST00000524815 628 ntTSL 4 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 EHF-205ENST00000527935 557 ntTSL 2 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 CTBP2P3-201ENST00000585629 1255 ntBASIC21.85■■□□□ 1.09
NINLQ9Y2I6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 PCDHA14-201ENST00000506751 2298 ntBASIC21.84■■□□□ 1.09
NINLQ9Y2I6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 RN7SL752P-201ENST00000463779 287 ntBASIC21.84■■□□□ 1.09
NINLQ9Y2I6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 AL033527.4-201ENST00000641026 673 ntBASIC21.84■■□□□ 1.09
NINLQ9Y2I6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NINLQ9Y2I6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
NINLQ9Y2I6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC21.83■■□□□ 1.09
NINLQ9Y2I6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NINLQ9Y2I6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
NINLQ9Y2I6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
NINLQ9Y2I6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NINLQ9Y2I6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
NINLQ9Y2I6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
NINLQ9Y2I6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NINLQ9Y2I6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 AC000095.1-201ENST00000603208 874 ntBASIC21.83■■□□□ 1.08
NINLQ9Y2I6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
NINLQ9Y2I6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 RN7SL399P-201ENST00000471648 279 ntBASIC21.82■■□□□ 1.08
NINLQ9Y2I6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 AC092552.1-201ENST00000547243 906 ntBASIC21.82■■□□□ 1.08
NINLQ9Y2I6 AC106886.1-201ENST00000568660 600 ntBASIC21.82■■□□□ 1.08
NINLQ9Y2I6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 BRI3BPP1-201ENST00000594224 787 ntBASIC21.82■■□□□ 1.08
NINLQ9Y2I6 WFDC1-204ENST00000613603 549 ntBASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms