Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 AL162726.2-201ENST00000438986 1017 ntBASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 AC244107.1-201ENST00000442033 332 ntBASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 ENPP7P5-201ENST00000541031 1031 ntBASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 AC132938.2-201ENST00000579188 680 ntBASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 AL591163.1-201ENST00000641757 987 ntBASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 AC133539.2-201ENST00000604757 467 ntBASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPO2Q9UMS6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 AL121723.1-201ENST00000445194 1519 ntBASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 TTTY23B-201ENST00000442790 549 ntBASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 GPR53P-205ENST00000457298 1084 ntBASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 AC124067.4-201ENST00000519691 2379 ntBASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 PCDHA14-201ENST00000506751 2298 ntBASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SYNPO2Q9UMS6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms