Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 AC004987.2-201ENST00000395959 1148 ntBASIC15.42■□□□□ 0.06
BRF2Q9HAW0 HTR5BP-201ENST00000430851 1154 ntBASIC15.42■□□□□ 0.06
BRF2Q9HAW0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.42■□□□□ 0.06
BRF2Q9HAW0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 PRAL-201ENST00000624952 3286 ntBASIC15.41■□□□□ 0.06
BRF2Q9HAW0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 AC022532.1-201ENST00000624563 1728 ntBASIC15.41■□□□□ 0.06
BRF2Q9HAW0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 RPS8P6-201ENST00000426177 609 ntBASIC15.41■□□□□ 0.06
BRF2Q9HAW0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 TIMM8BP1-201ENST00000452384 211 ntBASIC15.41■□□□□ 0.06
BRF2Q9HAW0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRF2Q9HAW0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 ELL2P1-201ENST00000413990 1906 ntBASIC15.4■□□□□ 0.06
BRF2Q9HAW0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms