Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 CYP4F24P-201ENST00000586049 1580 ntBASIC16.61■□□□□ 0.25
RPRD1AQ96P16 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 RPL37AP1-201ENST00000412502 279 ntBASIC16.61■□□□□ 0.25
RPRD1AQ96P16 HMGN1P19-201ENST00000436976 333 ntBASIC16.61■□□□□ 0.25
RPRD1AQ96P16 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 AC243562.2-201ENST00000561247 970 ntBASIC16.61■□□□□ 0.25
RPRD1AQ96P16 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPRD1AQ96P16 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 MIR648-201ENST00000385046 94 ntBASIC16.6■□□□□ 0.25
RPRD1AQ96P16 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 AC011467.4-201ENST00000594891 528 ntBASIC16.6■□□□□ 0.25
RPRD1AQ96P16 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 AL691432.1-201ENST00000596308 1422 ntBASIC16.6■□□□□ 0.25
RPRD1AQ96P16 AC100757.3-201ENST00000622361 1406 ntBASIC16.6■□□□□ 0.25
RPRD1AQ96P16 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.6■□□□□ 0.25
RPRD1AQ96P16 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 CYP2T1P-202ENST00000641596 2535 ntBASIC16.59■□□□□ 0.25
RPRD1AQ96P16 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.59■□□□□ 0.25
RPRD1AQ96P16 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 AL080243.2-201ENST00000418783 582 ntBASIC16.59■□□□□ 0.25
RPRD1AQ96P16 AC241585.1-201ENST00000433527 519 ntBASIC16.59■□□□□ 0.25
RPRD1AQ96P16 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.59■□□□□ 0.25
RPRD1AQ96P16 AL512638.1-201ENST00000457493 794 ntBASIC16.59■□□□□ 0.25
RPRD1AQ96P16 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 RNA5SP421-201ENST00000516864 134 ntBASIC16.59■□□□□ 0.25
RPRD1AQ96P16 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 TEX28P1-201ENST00000613479 1221 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms