Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 DDX39AP1-201ENST00000445147 1181 ntBASIC9.72□□□□□ -0.85
HSPG2P98160 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC9.72□□□□□ -0.85
HSPG2P98160 AL391280.1-201ENST00000506969 1062 ntBASIC9.72□□□□□ -0.85
HSPG2P98160 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
HSPG2P98160 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC9.72□□□□□ -0.85
HSPG2P98160 ETV2-207ENST00000619399 994 ntTSL 5 BASIC9.72□□□□□ -0.85
HSPG2P98160 AC006453.1-201ENST00000636037 1257 ntBASIC9.72□□□□□ -0.85
HSPG2P98160 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 AL138781.2-201ENST00000617896 1843 ntBASIC9.72□□□□□ -0.85
HSPG2P98160 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
HSPG2P98160 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
HSPG2P98160 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC9.72□□□□□ -0.85
HSPG2P98160 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC9.72□□□□□ -0.85
HSPG2P98160 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 AGPAT5P1-201ENST00000455855 1019 ntBASIC9.72□□□□□ -0.85
HSPG2P98160 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC9.72□□□□□ -0.85
HSPG2P98160 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC9.72□□□□□ -0.85
HSPG2P98160 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC9.72□□□□□ -0.85
HSPG2P98160 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC9.72□□□□□ -0.85
HSPG2P98160 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC9.72□□□□□ -0.85
HSPG2P98160 AC091544.8-201ENST00000619490 361 ntBASIC9.72□□□□□ -0.85
HSPG2P98160 LETM1P2-201ENST00000597330 2178 ntBASIC9.72□□□□□ -0.85
HSPG2P98160 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC9.72□□□□□ -0.85
HSPG2P98160 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC9.72□□□□□ -0.85
HSPG2P98160 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC9.72□□□□□ -0.85
HSPG2P98160 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
HSPG2P98160 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
HSPG2P98160 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 AL133466.1-201ENST00000447582 150 ntBASIC9.72□□□□□ -0.85
HSPG2P98160 AC242376.1-201ENST00000559033 726 ntBASIC9.72□□□□□ -0.85
HSPG2P98160 RNF146-211ENST00000609447 607 ntTSL 4 BASIC9.72□□□□□ -0.85
HSPG2P98160 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC9.72□□□□□ -0.85
HSPG2P98160 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC9.72□□□□□ -0.85
HSPG2P98160 AC105137.3-201ENST00000617588 984 ntBASIC9.72□□□□□ -0.85
HSPG2P98160 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC9.72□□□□□ -0.85
HSPG2P98160 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
HSPG2P98160 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
HSPG2P98160 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC9.71□□□□□ -0.85
HSPG2P98160 OS9-205ENST00000413095 1660 ntTSL 2 BASIC9.71□□□□□ -0.85
HSPG2P98160 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
HSPG2P98160 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
HSPG2P98160 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC9.71□□□□□ -0.85
HSPG2P98160 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.85
HSPG2P98160 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC9.71□□□□□ -0.85
HSPG2P98160 KLF2P2-201ENST00000416807 1039 ntBASIC9.71□□□□□ -0.85
HSPG2P98160 NAGK-204ENST00000443872 878 ntTSL 3 BASIC9.71□□□□□ -0.85
HSPG2P98160 ALG1L13P-202ENST00000519320 584 ntBASIC9.71□□□□□ -0.85
HSPG2P98160 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
HSPG2P98160 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
HSPG2P98160 NF2-208ENST00000403435 2568 ntTSL 5 BASIC9.71□□□□□ -0.85
HSPG2P98160 AC004899.1-201ENST00000424687 1714 ntBASIC9.71□□□□□ -0.85
HSPG2P98160 AC005622.1-201ENST00000636801 1703 ntBASIC9.71□□□□□ -0.85
HSPG2P98160 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.85
HSPG2P98160 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC9.71□□□□□ -0.85
HSPG2P98160 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
HSPG2P98160 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC9.71□□□□□ -0.85
HSPG2P98160 POU5F1P6-201ENST00000466990 990 ntBASIC9.71□□□□□ -0.85
HSPG2P98160 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC9.71□□□□□ -0.85
HSPG2P98160 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC9.71□□□□□ -0.85
HSPG2P98160 BX539320.1-201ENST00000623759 877 ntBASIC9.71□□□□□ -0.85
HSPG2P98160 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC9.71□□□□□ -0.85
HSPG2P98160 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC9.71□□□□□ -0.85
HSPG2P98160 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC9.71□□□□□ -0.86
HSPG2P98160 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC9.71□□□□□ -0.86
HSPG2P98160 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
HSPG2P98160 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC9.71□□□□□ -0.86
HSPG2P98160 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
HSPG2P98160 LINC02012-201ENST00000608206 1725 ntBASIC9.71□□□□□ -0.86
HSPG2P98160 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
HSPG2P98160 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
HSPG2P98160 AL691432.1-201ENST00000596308 1422 ntBASIC9.71□□□□□ -0.86
HSPG2P98160 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
HSPG2P98160 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC9.71□□□□□ -0.86
HSPG2P98160 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
HSPG2P98160 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.86
HSPG2P98160 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
HSPG2P98160 MIR4783-201ENST00000580343 82 ntBASIC9.71□□□□□ -0.86
HSPG2P98160 AC092171.5-201ENST00000608012 942 ntBASIC9.71□□□□□ -0.86
HSPG2P98160 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC9.71□□□□□ -0.86
HSPG2P98160 AC007613.1-201ENST00000572811 2597 ntBASIC9.71□□□□□ -0.86
HSPG2P98160 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
HSPG2P98160 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
HSPG2P98160 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
HSPG2P98160 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
HSPG2P98160 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
HSPG2P98160 TK1-203ENST00000588734 1681 ntTSL 2 BASIC9.71□□□□□ -0.86
HSPG2P98160 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC9.71□□□□□ -0.86
HSPG2P98160 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms