Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CLDN2P57739 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN2P57739 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN2P57739 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 AC004987.2-201ENST00000395959 1148 ntBASIC15.87■□□□□ 0.13
CLDN2P57739 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 AZGP1P1-201ENST00000411909 902 ntBASIC15.87■□□□□ 0.13
CLDN2P57739 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.87■□□□□ 0.13
CLDN2P57739 INE1-201ENST00000456273 945 ntBASIC15.87■□□□□ 0.13
CLDN2P57739 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.87■□□□□ 0.13
CLDN2P57739 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN2P57739 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN2P57739 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.87■□□□□ 0.13
CLDN2P57739 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.87■□□□□ 0.13
CLDN2P57739 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CLDN2P57739 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CLDN2P57739 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
CLDN2P57739 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
CLDN2P57739 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CLDN2P57739 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLDN2P57739 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN2P57739 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN2P57739 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN2P57739 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN2P57739 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLDN2P57739 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN2P57739 AC098614.1-201ENST00000368528 745 ntBASIC15.86■□□□□ 0.13
CLDN2P57739 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN2P57739 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN2P57739 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN2P57739 AP006294.1-201ENST00000415407 339 ntBASIC15.86■□□□□ 0.13
CLDN2P57739 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN2P57739 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.86■□□□□ 0.13
CLDN2P57739 RN7SL752P-201ENST00000463779 287 ntBASIC15.86■□□□□ 0.13
CLDN2P57739 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN2P57739 MEIS3P1-201ENST00000495167 958 ntBASIC15.86■□□□□ 0.13
CLDN2P57739 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN2P57739 AC243562.2-201ENST00000561247 970 ntBASIC15.86■□□□□ 0.13
CLDN2P57739 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
CLDN2P57739 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.86■□□□□ 0.13
CLDN2P57739 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN2P57739 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLDN2P57739 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN2P57739 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN2P57739 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CLDN2P57739 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN2P57739 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN2P57739 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN2P57739 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN2P57739 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
CLDN2P57739 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN2P57739 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CLDN2P57739 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN2P57739 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CLDN2P57739 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN2P57739 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN2P57739 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN2P57739 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN2P57739 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN2P57739 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN2P57739 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN2P57739 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
CLDN2P57739 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN2P57739 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.85■□□□□ 0.13
CLDN2P57739 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN2P57739 BNIP3P1-202ENST00000550043 1585 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms