Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.38□□□□□ -0.11
Trdmt1O55055 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trdmt1O55055 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.38□□□□□ -0.11
Trdmt1O55055 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Trdmt1O55055 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.37□□□□□ -0.11
Trdmt1O55055 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.37□□□□□ -0.11
Trdmt1O55055 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.37□□□□□ -0.11
Trdmt1O55055 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trdmt1O55055 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.37□□□□□ -0.11
Trdmt1O55055 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trdmt1O55055 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trdmt1O55055 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trdmt1O55055 Mir3547-201ENSMUST00000175461 88 ntBASIC14.37□□□□□ -0.11
Trdmt1O55055 Gm27046-201ENSMUST00000182160 463 ntBASIC14.37□□□□□ -0.11
Trdmt1O55055 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.37□□□□□ -0.11
Trdmt1O55055 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trdmt1O55055 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trdmt1O55055 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Trdmt1O55055 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.37□□□□□ -0.11
Trdmt1O55055 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdmt1O55055 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trdmt1O55055 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Gm4909-201ENSMUST00000118749 794 ntBASIC14.36□□□□□ -0.11
Trdmt1O55055 Gm14109-201ENSMUST00000118814 309 ntBASIC14.36□□□□□ -0.11
Trdmt1O55055 Gm13665-201ENSMUST00000120830 528 ntBASIC14.36□□□□□ -0.11
Trdmt1O55055 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.36□□□□□ -0.11
Trdmt1O55055 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.36□□□□□ -0.11
Trdmt1O55055 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.36□□□□□ -0.11
Trdmt1O55055 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.36□□□□□ -0.11
Trdmt1O55055 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.36□□□□□ -0.11
Trdmt1O55055 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdmt1O55055 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.35□□□□□ -0.11
Trdmt1O55055 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.35□□□□□ -0.11
Trdmt1O55055 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Mir874-201ENSMUST00000104769 76 ntBASIC14.35□□□□□ -0.11
Trdmt1O55055 Gm14028-201ENSMUST00000117434 479 ntBASIC14.35□□□□□ -0.11
Trdmt1O55055 Gm12291-201ENSMUST00000121627 311 ntBASIC14.35□□□□□ -0.11
Trdmt1O55055 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.35□□□□□ -0.11
Trdmt1O55055 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.35□□□□□ -0.11
Trdmt1O55055 Gm25043-201ENSMUST00000158604 212 ntBASIC14.35□□□□□ -0.11
Trdmt1O55055 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trdmt1O55055 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.35□□□□□ -0.11
Trdmt1O55055 Gm3096-201ENSMUST00000185770 364 ntBASIC14.35□□□□□ -0.11
Trdmt1O55055 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms