Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCN11AQ9UI33 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 ACTBP8-201ENST00000403258 1108 ntBASIC20.35■□□□□ 0.85
SCN11AQ9UI33 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 AC106820.2-201ENST00000563775 3264 ntBASIC20.35■□□□□ 0.85
SCN11AQ9UI33 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SCN11AQ9UI33 AC069224.1-201ENST00000566372 1715 ntBASIC20.35■□□□□ 0.85
SCN11AQ9UI33 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 GAPDHP40-201ENST00000505218 1006 ntBASIC20.34■□□□□ 0.85
SCN11AQ9UI33 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 MIR4313-201ENST00000580760 101 ntBASIC20.34■□□□□ 0.85
SCN11AQ9UI33 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 GUK1-206ENST00000366723 845 ntTSL 5 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 AC092933.1-201ENST00000393644 945 ntBASIC20.34■□□□□ 0.85
SCN11AQ9UI33 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 AC026954.1-201ENST00000429771 1293 ntBASIC20.34■□□□□ 0.85
SCN11AQ9UI33 ZNF767P-206ENST00000513792 565 ntBASIC20.34■□□□□ 0.85
SCN11AQ9UI33 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC20.34■□□□□ 0.85
SCN11AQ9UI33 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SCN11AQ9UI33 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
SCN11AQ9UI33 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCN11AQ9UI33 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCN11AQ9UI33 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SCN11AQ9UI33 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCN11AQ9UI33 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SCN11AQ9UI33 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 AC079316.1-201ENST00000548397 411 ntBASIC20.33■□□□□ 0.84
SCN11AQ9UI33 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 DERL2-202ENST00000570848 657 ntTSL 5 BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SCN11AQ9UI33 AC011477.6-201ENST00000604980 1927 ntBASIC20.32■□□□□ 0.84
SCN11AQ9UI33 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 MIR1247-201ENST00000408206 136 ntBASIC20.32■□□□□ 0.84
SCN11AQ9UI33 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN11AQ9UI33 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms