Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 FO393414.2-201ENST00000405153 598 ntBASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 HIST3H2BA-201ENST00000436555 524 ntBASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 SDHAP3-202ENST00000515467 728 ntBASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 SPDYE22P-201ENST00000582158 798 ntBASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCF1Q9UBD9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 AC004987.2-201ENST00000395959 1148 ntBASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 AC243562.2-201ENST00000561247 970 ntBASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 AC104794.3-201ENST00000566840 1248 ntBASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 AF228730.6-201ENST00000641497 218 ntBASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 AC084121.3-201ENST00000641716 218 ntBASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 AC105233.6-201ENST00000642093 218 ntBASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCF1Q9UBD9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLCF1Q9UBD9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLCF1Q9UBD9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.31□□□□□ -0.12
CLCF1Q9UBD9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLCF1Q9UBD9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
CLCF1Q9UBD9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CLCF1Q9UBD9 AC009053.2-201ENST00000563701 2365 ntBASIC14.31□□□□□ -0.12
CLCF1Q9UBD9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms