Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 AC008677.1-201ENST00000519230 1561 ntBASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 AC246785.2-201ENST00000432512 513 ntBASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 AC009533.2-201ENST00000543664 586 ntBASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 AC093458.2-201ENST00000623150 629 ntBASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 AL358472.4-201ENST00000633140 710 ntBASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 AC004817.3-201ENST00000602957 2129 ntBASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP6Q96FZ7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP6Q96FZ7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.33■□□□□ 0.21
CHMP6Q96FZ7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP6Q96FZ7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP6Q96FZ7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP6Q96FZ7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
CHMP6Q96FZ7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP6Q96FZ7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CHMP6Q96FZ7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 MIR1224-201ENST00000408193 85 ntBASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 LINC00982-205ENST00000420957 435 ntBASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 AL020989.1-201ENST00000422979 469 ntBASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 AC091607.1-201ENST00000490318 1060 ntBASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 AC096582.2-201ENST00000510860 516 ntBASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 AP000867.3-201ENST00000524675 377 ntBASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 AC069148.1-201ENST00000608741 768 ntBASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 AL161772.1-201ENST00000610494 4412 ntBASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms