Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 AC105021.1-202ENST00000570572 669 ntBASIC17.34■□□□□ 0.37
SEMA4DQ92854 CYP4F24P-201ENST00000586049 1580 ntBASIC17.34■□□□□ 0.37
SEMA4DQ92854 AC011477.6-201ENST00000604980 1927 ntBASIC17.34■□□□□ 0.37
SEMA4DQ92854 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 AC003101.2-201ENST00000612557 442 ntBASIC17.34■□□□□ 0.37
SEMA4DQ92854 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 LINC00628-201ENST00000628516 1289 ntBASIC17.34■□□□□ 0.37
SEMA4DQ92854 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.33■□□□□ 0.37
SEMA4DQ92854 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SEMA4DQ92854 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.33■□□□□ 0.37
SEMA4DQ92854 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SEMA4DQ92854 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SEMA4DQ92854 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SEMA4DQ92854 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SEMA4DQ92854 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.33■□□□□ 0.37
SEMA4DQ92854 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SEMA4DQ92854 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.33■□□□□ 0.36
SEMA4DQ92854 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.33■□□□□ 0.36
SEMA4DQ92854 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.33■□□□□ 0.36
SEMA4DQ92854 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.33■□□□□ 0.36
SEMA4DQ92854 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.33■□□□□ 0.36
SEMA4DQ92854 AL512356.2-201ENST00000546955 174 ntBASIC17.33■□□□□ 0.36
SEMA4DQ92854 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.33■□□□□ 0.36
SEMA4DQ92854 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SEMA4DQ92854 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SEMA4DQ92854 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.33■□□□□ 0.36
SEMA4DQ92854 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SEMA4DQ92854 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEMA4DQ92854 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.32■□□□□ 0.36
SEMA4DQ92854 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 TSEN15P1-201ENST00000423257 515 ntBASIC17.32■□□□□ 0.36
SEMA4DQ92854 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 AL139010.1-201ENST00000454878 894 ntBASIC17.32■□□□□ 0.36
SEMA4DQ92854 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 AC243562.2-201ENST00000561247 970 ntBASIC17.32■□□□□ 0.36
SEMA4DQ92854 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 AL133215.2-201ENST00000609242 977 ntBASIC17.32■□□□□ 0.36
SEMA4DQ92854 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SEMA4DQ92854 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.32■□□□□ 0.36
SEMA4DQ92854 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEMA4DQ92854 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SEMA4DQ92854 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEMA4DQ92854 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEMA4DQ92854 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SEMA4DQ92854 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.31■□□□□ 0.36
SEMA4DQ92854 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SEMA4DQ92854 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEMA4DQ92854 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEMA4DQ92854 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEMA4DQ92854 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEMA4DQ92854 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.31■□□□□ 0.36
SEMA4DQ92854 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEMA4DQ92854 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms