Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 AL513480.1-201ENST00000451731 511 ntBASIC16.32■□□□□ 0.2
RAPH1Q70E73 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 U1.21-201ENST00000580816 167 ntBASIC16.32■□□□□ 0.2
RAPH1Q70E73 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 AL031055.1-201ENST00000606362 631 ntBASIC16.32■□□□□ 0.2
RAPH1Q70E73 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 AC112504.1-201ENST00000623415 1841 ntBASIC16.32■□□□□ 0.2
RAPH1Q70E73 AC117500.6-201ENST00000624871 588 ntBASIC16.32■□□□□ 0.2
RAPH1Q70E73 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAPH1Q70E73 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.32■□□□□ 0.2
RAPH1Q70E73 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 AC148477.8-201ENST00000624298 468 ntBASIC16.31■□□□□ 0.2
RAPH1Q70E73 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.31■□□□□ 0.2
RAPH1Q70E73 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAPH1Q70E73 AC069224.1-201ENST00000566372 1715 ntBASIC16.31■□□□□ 0.2
RAPH1Q70E73 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.31■□□□□ 0.2
RAPH1Q70E73 AP002414.2-201ENST00000591780 3365 ntBASIC16.3■□□□□ 0.2
RAPH1Q70E73 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 HMGA1P7-201ENST00000406908 502 ntBASIC16.3■□□□□ 0.2
RAPH1Q70E73 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 AC108751.1-201ENST00000490852 363 ntBASIC16.3■□□□□ 0.2
RAPH1Q70E73 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 FAM215A-202ENST00000632077 792 ntBASIC16.3■□□□□ 0.2
RAPH1Q70E73 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms