Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.25□□□□□ -0.29
SPCS3P61009 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 MTDHP4-201ENST00000600287 670 ntBASIC13.25□□□□□ -0.29
SPCS3P61009 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.25□□□□□ -0.29
SPCS3P61009 AL355877.3-201ENST00000622820 899 ntBASIC13.25□□□□□ -0.29
SPCS3P61009 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.25□□□□□ -0.29
SPCS3P61009 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.25□□□□□ -0.29
SPCS3P61009 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SPCS3P61009 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.25□□□□□ -0.29
SPCS3P61009 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SPCS3P61009 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SPCS3P61009 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SPCS3P61009 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.25□□□□□ -0.29
SPCS3P61009 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS3P61009 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.24□□□□□ -0.29
SPCS3P61009 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.24□□□□□ -0.29
SPCS3P61009 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
SPCS3P61009 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.24□□□□□ -0.29
SPCS3P61009 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
SPCS3P61009 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SPCS3P61009 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.24□□□□□ -0.29
SPCS3P61009 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.24□□□□□ -0.29
SPCS3P61009 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.24□□□□□ -0.29
SPCS3P61009 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.24□□□□□ -0.29
SPCS3P61009 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.24□□□□□ -0.29
SPCS3P61009 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 SCARNA2-201ENST00000458748 420 ntBASIC13.24□□□□□ -0.29
SPCS3P61009 AC107918.2-201ENST00000530817 355 ntBASIC13.24□□□□□ -0.29
SPCS3P61009 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SPCS3P61009 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SPCS3P61009 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.24□□□□□ -0.29
SPCS3P61009 GGTLC5P-201ENST00000617623 998 ntBASIC13.24□□□□□ -0.29
SPCS3P61009 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.24□□□□□ -0.29
SPCS3P61009 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SPCS3P61009 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.24□□□□□ -0.29
SPCS3P61009 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.24□□□□□ -0.29
SPCS3P61009 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.24□□□□□ -0.29
SPCS3P61009 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.24□□□□□ -0.29
SPCS3P61009 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.24□□□□□ -0.29
SPCS3P61009 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SPCS3P61009 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
SPCS3P61009 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.24□□□□□ -0.29
SPCS3P61009 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.24□□□□□ -0.29
SPCS3P61009 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS3P61009 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.23□□□□□ -0.29
SPCS3P61009 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.23□□□□□ -0.29
SPCS3P61009 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SPCS3P61009 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.23□□□□□ -0.29
SPCS3P61009 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.23□□□□□ -0.29
SPCS3P61009 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.23□□□□□ -0.29
SPCS3P61009 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.23□□□□□ -0.29
SPCS3P61009 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.23□□□□□ -0.29
SPCS3P61009 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SPCS3P61009 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.23□□□□□ -0.29
SPCS3P61009 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms