Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC099548.2-209ENST00000480264 625 ntBASIC15.45■□□□□ 0.06
CLDN6P56747 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CLDN6P56747 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN6P56747 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN6P56747 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 SLC25A47P1-201ENST00000531577 414 ntBASIC15.45■□□□□ 0.06
CLDN6P56747 RARRES2P5-201ENST00000564013 466 ntBASIC15.45■□□□□ 0.06
CLDN6P56747 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN6P56747 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.45■□□□□ 0.06
CLDN6P56747 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CLDN6P56747 GGT4P-201ENST00000623672 1708 ntBASIC15.45■□□□□ 0.06
CLDN6P56747 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CLDN6P56747 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN6P56747 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN6P56747 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN6P56747 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLDN6P56747 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN6P56747 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CLDN6P56747 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLDN6P56747 AC005229.1-201ENST00000392885 409 ntBASIC15.44■□□□□ 0.06
CLDN6P56747 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.44■□□□□ 0.06
CLDN6P56747 BCRP2-202ENST00000447763 634 ntBASIC15.44■□□□□ 0.06
CLDN6P56747 BCRP6-201ENST00000510112 632 ntBASIC15.44■□□□□ 0.06
CLDN6P56747 BCRP7-201ENST00000511549 544 ntBASIC15.44■□□□□ 0.06
CLDN6P56747 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.44■□□□□ 0.06
CLDN6P56747 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN6P56747 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLDN6P56747 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 AC233724.13-201ENST00000598383 410 ntBASIC15.44■□□□□ 0.06
CLDN6P56747 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN6P56747 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.44■□□□□ 0.06
CLDN6P56747 MIR6869-201ENST00000619434 62 ntBASIC15.44■□□□□ 0.06
CLDN6P56747 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLDN6P56747 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.44■□□□□ 0.06
CLDN6P56747 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
CLDN6P56747 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLDN6P56747 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN6P56747 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN6P56747 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 AD000864.1-201ENST00000624076 2295 ntBASIC15.43■□□□□ 0.06
CLDN6P56747 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN6P56747 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CLDN6P56747 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.43■□□□□ 0.06
CLDN6P56747 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CLDN6P56747 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN6P56747 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 KRT43P-201ENST00000434019 910 ntBASIC15.43■□□□□ 0.06
CLDN6P56747 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CLDN6P56747 KLF2P4-201ENST00000451959 1225 ntBASIC15.43■□□□□ 0.06
CLDN6P56747 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN6P56747 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN6P56747 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.43■□□□□ 0.06
CLDN6P56747 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.43■□□□□ 0.06
CLDN6P56747 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.43■□□□□ 0.06
CLDN6P56747 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN6P56747 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.43■□□□□ 0.06
CLDN6P56747 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.43■□□□□ 0.06
CLDN6P56747 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 AC068587.10-201ENST00000641210 219 ntBASIC15.43■□□□□ 0.06
CLDN6P56747 CYP4F24P-201ENST00000586049 1580 ntBASIC15.43■□□□□ 0.06
CLDN6P56747 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN6P56747 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms