Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC22.68■■□□□ 1.22
CLTCL1P53675 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC22.68■■□□□ 1.22
CLTCL1P53675 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC22.68■■□□□ 1.22
CLTCL1P53675 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC22.68■■□□□ 1.22
CLTCL1P53675 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC22.68■■□□□ 1.22
CLTCL1P53675 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTCL1P53675 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC22.67■■□□□ 1.22
CLTCL1P53675 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC22.67■■□□□ 1.22
CLTCL1P53675 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC22.67■■□□□ 1.22
CLTCL1P53675 AC134312.5-201ENST00000568031 1313 ntBASIC22.67■■□□□ 1.22
CLTCL1P53675 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTCL1P53675 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTCL1P53675 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTCL1P53675 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTCL1P53675 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CLTCL1P53675 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
CLTCL1P53675 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CLTCL1P53675 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC22.67■■□□□ 1.22
CLTCL1P53675 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLTCL1P53675 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLTCL1P53675 DERL2-202ENST00000570848 657 ntTSL 5 BASIC22.67■■□□□ 1.22
CLTCL1P53675 RHOXF1P1-202ENST00000635473 501 ntBASIC22.67■■□□□ 1.22
CLTCL1P53675 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLTCL1P53675 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLTCL1P53675 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLTCL1P53675 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
CLTCL1P53675 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC22.66■■□□□ 1.22
CLTCL1P53675 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.66■■□□□ 1.22
CLTCL1P53675 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLTCL1P53675 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLTCL1P53675 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC22.66■■□□□ 1.22
CLTCL1P53675 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLTCL1P53675 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLTCL1P53675 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLTCL1P53675 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC22.66■■□□□ 1.22
CLTCL1P53675 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLTCL1P53675 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLTCL1P53675 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLTCL1P53675 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC22.66■■□□□ 1.22
CLTCL1P53675 FAM21FP-201ENST00000426241 1131 ntBASIC22.66■■□□□ 1.22
CLTCL1P53675 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC22.66■■□□□ 1.22
CLTCL1P53675 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC22.66■■□□□ 1.22
CLTCL1P53675 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLTCL1P53675 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC22.66■■□□□ 1.22
CLTCL1P53675 DUX4L45-201ENST00000566406 1057 ntBASIC22.66■■□□□ 1.22
CLTCL1P53675 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC22.66■■□□□ 1.22
CLTCL1P53675 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLTCL1P53675 TK1-203ENST00000588734 1681 ntTSL 2 BASIC22.66■■□□□ 1.22
CLTCL1P53675 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC22.66■■□□□ 1.22
CLTCL1P53675 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLTCL1P53675 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CLTCL1P53675 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
CLTCL1P53675 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC22.66■■□□□ 1.22
CLTCL1P53675 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CLTCL1P53675 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLTCL1P53675 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CLTCL1P53675 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 CNN2P8-201ENST00000421872 913 ntBASIC22.65■■□□□ 1.22
CLTCL1P53675 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 AL590640.2-201ENST00000457038 527 ntBASIC22.65■■□□□ 1.22
CLTCL1P53675 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC22.65■■□□□ 1.22
CLTCL1P53675 NOP2-211ENST00000540228 668 ntTSL 2 BASIC22.65■■□□□ 1.22
CLTCL1P53675 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC22.65■■□□□ 1.22
CLTCL1P53675 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.65■■□□□ 1.22
CLTCL1P53675 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 AC011477.6-201ENST00000604980 1927 ntBASIC22.65■■□□□ 1.22
CLTCL1P53675 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLTCL1P53675 SP100-205ENST00000409824 1802 ntTSL 5 BASIC22.64■■□□□ 1.22
CLTCL1P53675 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLTCL1P53675 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC22.64■■□□□ 1.22
CLTCL1P53675 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC22.64■■□□□ 1.22
CLTCL1P53675 ACTBP11-201ENST00000436287 1126 ntBASIC22.64■■□□□ 1.22
CLTCL1P53675 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
CLTCL1P53675 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC22.64■■□□□ 1.22
CLTCL1P53675 MIR4313-201ENST00000580760 101 ntBASIC22.64■■□□□ 1.22
CLTCL1P53675 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLTCL1P53675 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLTCL1P53675 HADH-212ENST00000638621 741 ntTSL 5 BASIC22.64■■□□□ 1.22
CLTCL1P53675 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CLTCL1P53675 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLTCL1P53675 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLTCL1P53675 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC22.64■■□□□ 1.22
CLTCL1P53675 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CLTCL1P53675 AC069224.1-201ENST00000566372 1715 ntBASIC22.64■■□□□ 1.21
CLTCL1P53675 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLTCL1P53675 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CLTCL1P53675 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CLTCL1P53675 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC22.64■■□□□ 1.21
CLTCL1P53675 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms