Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF144AP50876 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF144AP50876 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF144AP50876 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.08■□□□□ 0.01
RNF144AP50876 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.08■□□□□ 0.01
RNF144AP50876 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF144AP50876 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.08■□□□□ 0.01
RNF144AP50876 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF144AP50876 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF144AP50876 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF144AP50876 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
RNF144AP50876 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF144AP50876 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
RNF144AP50876 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.08■□□□□ 0
RNF144AP50876 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.08■□□□□ 0
RNF144AP50876 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
RNF144AP50876 LINC00554-201ENST00000564841 3011 ntBASIC15.08■□□□□ 0
RNF144AP50876 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
RNF144AP50876 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RNF144AP50876 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.08■□□□□ 0
RNF144AP50876 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.08■□□□□ 0
RNF144AP50876 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.08■□□□□ 0
RNF144AP50876 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.08■□□□□ 0
RNF144AP50876 POU5F1P6-201ENST00000466990 990 ntBASIC15.08■□□□□ 0
RNF144AP50876 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.08■□□□□ 0
RNF144AP50876 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.08■□□□□ 0
RNF144AP50876 AC112191.1-201ENST00000523689 701 ntBASIC15.08■□□□□ 0
RNF144AP50876 AC040169.1-201ENST00000565382 521 ntBASIC15.08■□□□□ 0
RNF144AP50876 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.08■□□□□ 0
RNF144AP50876 AC002347.1-201ENST00000569543 541 ntBASIC15.08■□□□□ 0
RNF144AP50876 MIR3909-201ENST00000579518 119 ntBASIC15.08■□□□□ 0
RNF144AP50876 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.08■□□□□ 0
RNF144AP50876 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.08■□□□□ 0
RNF144AP50876 AC092902.6-201ENST00000641783 218 ntBASIC15.08■□□□□ 0
RNF144AP50876 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 PMS2P7-201ENST00000506558 1336 ntBASIC15.08■□□□□ 0
RNF144AP50876 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.08■□□□□ 0
RNF144AP50876 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.08■□□□□ 0
RNF144AP50876 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.08■□□□□ 0
RNF144AP50876 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RNF144AP50876 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.08■□□□□ 0
RNF144AP50876 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.08■□□□□ 0
RNF144AP50876 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RNF144AP50876 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RNF144AP50876 WASH6P-202ENST00000359512 1437 ntBASIC15.08■□□□□ 0
RNF144AP50876 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RNF144AP50876 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF144AP50876 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RNF144AP50876 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.07■□□□□ 0
RNF144AP50876 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.07■□□□□ 0
RNF144AP50876 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.07■□□□□ 0
RNF144AP50876 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 AL603832.2-201ENST00000566195 2125 ntBASIC15.07■□□□□ 0
RNF144AP50876 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.07■□□□□ 0
RNF144AP50876 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.07■□□□□ 0
RNF144AP50876 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.07■□□□□ 0
RNF144AP50876 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 AC002056.1-201ENST00000395613 760 ntBASIC15.07■□□□□ 0
RNF144AP50876 MTATP6P19-201ENST00000413797 659 ntBASIC15.07■□□□□ 0
RNF144AP50876 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.07■□□□□ 0
RNF144AP50876 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC15.07■□□□□ 0
RNF144AP50876 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RNF144AP50876 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC15.07■□□□□ 0
RNF144AP50876 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.07■□□□□ 0
RNF144AP50876 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.07■□□□□ 0
RNF144AP50876 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.07■□□□□ 0
RNF144AP50876 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
RNF144AP50876 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.07■□□□□ 0
RNF144AP50876 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms